中国农业科技导报 ›› 2019, Vol. 21 ›› Issue (7): 31-36.DOI: 10.13304/j.nykjdb.2019.0019

• 生物技术 生命科学 • 上一篇    下一篇

水稻控制光响应基因Nfm1的图位克隆

丁一峰1,2,杨冀轩1,陈国鑫1,王雁伟1,张治国1*   

  1. 1.中国农业科学院生物技术研究所, 北京 100081; 2.首都师范大学生命科学学院, 北京 100048
  • 收稿日期:2019-01-08 出版日期:2019-07-15 发布日期:2019-02-18
  • 通讯作者: *通信作者:张治国,研究员,博士生导师,研究方向为植物功能基因研究。E-mail :zhangzhiguo@caas.cn
  • 作者简介:丁一峰,硕士研究生,研究方向为植物基因功能。E-mail :dyifenggg@126.com。
  • 基金资助:
    国家自然科学基金项目(31771884)资助。

Map-based Cloning of the Light Response Gene Nfm1 in Rice

DING Yifeng1,2, YANG Jixuan1, CHEN Guoxin1, WANG Yanwei1, ZHANG Zhiguo1*   

  1. 1.Biotechnology Research of Institute, Chinese Academy of Agricultural Sciences, Beijing 100081; 2.College of Life Sciences, Capital Normal University, Beijing 100048, China
  • Received:2019-01-08 Online:2019-07-15 Published:2019-02-18

摘要: 抽穗期是水稻的重要农艺性状之一,决定着品种的地区与季节适应性,因而成为水稻育种家考虑的主要目标性状之一。前期克隆了一些控制水稻抽穗期的主效基因,但是对控制水稻抽穗期的调控因子的鉴定还非常有限。通过筛选水稻突变体库,获得一份在长日照条件下(LD)不开花的突变体(non flowering mutant 1,nfm1),其在短日照条件下能够正常开花。利用图位克隆,将Nfm1基因缩小在2 个分子标记InDel1与InDel2之间,范围在50 kb区间内,该区间包含4个基因。通过序列测定,确定LOC_Os09g13740为Nfm1的候选基因。在突变体nfm1中,LOC_Os09g13740基因的第六外显子242处丝氨酸突变为异亮氨酸。突变体nfm1等位于已报道的水稻突变体lvp1-1,Nfm1编码一个含有SET结构域的组蛋白甲基转移酶SDG724。值得关注的是,在短日照条件下,突变体nfm1显著地提高每穗粒数,显示LOC_Os09g13740基因的弱表达可能在适应的生态区具有潜在的生产应用潜力,为培育适应不同生态区域的水稻品种提供了参考。

关键词: 水稻 , 突变体nfm1, 图位克隆, 光响应

Abstract: The heading stage of rice is an important agronomic trait, which determines the regional and seasonal adaptability of the variety, thus it was considered one of the main target traits by rice breeders. Although some of the major genes controlling rice heading stage have been cloned in the early researches, the identification of the regulatory factors controlling rice heading stage is still very limited. By screening the rice mutant library, a non-flowering mutant (nfm1) was obtained under long-day conditions (LD), and the mutant nfm1 was able to flower normally under short-day conditions. Using map-based cloning, the Nfm1 gene was located between two molecular markers, InDel1 and InDel2, in the 50 kb interval, which contained four genes. LOC_Os09g13740 was identified as a candidate gene for Nfm1 after sequence analysis. In the mutant nfm1, the serine at position 242 of the sixth exon of the LOC_Os09g13740 gene was mutated to isoleucine. The mutant nfm1 and the reported rice mutant lvp1-1 were alleles. The Nfm1 encoded a histone methyltransferase SDG724 containing the SET domain. It was noteworthy that under short-day conditions, the mutant nfm1 significantly increased the number of grains per panicle, indicating that the weak expression of the LOC_Os09g13740 gene might have potential production potential in the adapted ecoregion. Above results provided references for breeding rice varieties adapted to different ecological regions.

Key words: rice, nfm1 mutant, map-based cloning, light response