Journal of Agricultural Science and Technology ›› 2025, Vol. 27 ›› Issue (4): 22-35.DOI: 10.13304/j.nykjdb.2024.0620
• BIOTECHNOLOGY & LIFE SCIENCE • Previous Articles Next Articles
Bei MA1,2(), Jie GONG2(
), Yinke DU2,3, Yuwei GAN1,2, Rong CHENG2,3, Bo ZHU1, Lixia YI1(
), Jinxiu MA2(
), Shiqing GAO2(
)
Received:
2024-08-02
Accepted:
2024-09-18
Online:
2025-04-15
Published:
2025-04-15
Contact:
Lixia YI,Jinxiu MA,Shiqing GAO
马蓓1,2(), 公杰2(
), 杜银柯2,3, 甘雨薇1,2, 程蓉2,3, 朱波1, 易丽霞1(
), 马锦绣2(
), 高世庆2(
)
通讯作者:
易丽霞,马锦绣,高世庆
作者简介:
马蓓 E-mail:18034656852@163.com基金资助:
CLC Number:
Bei MA, Jie GONG, Yinke DU, Yuwei GAN, Rong CHENG, Bo ZHU, Lixia YI, Jinxiu MA, Shiqing GAO. Identification and Expression Analysis of TaINP1 Gene Related to Pollen Pore Development in Wheat[J]. Journal of Agricultural Science and Technology, 2025, 27(4): 22-35.
马蓓, 公杰, 杜银柯, 甘雨薇, 程蓉, 朱波, 易丽霞, 马锦绣, 高世庆. 小麦花粉孔发育相关TaINP1基因鉴定及表达分析[J]. 中国农业科技导报, 2025, 27(4): 22-35.
基因名称 Gene name | 正向引物 Forward primer (5’-3’) | 反向引物 Reverse primer (5’-3’) |
---|---|---|
TaINP2.2 | TCGTAGATGGGATAATGGGGC | CAAGCCACAGGAAGCACCTT |
TaINP2.5 | ATTGGGTTTCAGACGGAGCA | CAAGGGCTTGTCAGACCTGT |
TaINP2.8 | CCGCTGGAATCTTGTCCGTTA | TTCCTTGCAGCCTCACGATT |
TaINP3.2 | TCCATGAGTGGAAATGGGGC | ACTACGCAGCTCAGTATCGC |
TaINP3.7 | TTTTAAAGCTTGAACCCCTAACTGA | ACCCAGCCAATGTTTCTGCC |
TaINP3.12 | TTTTAAAGCTTGAACCCCTAACTGA | CCGATAGACCCAGCCAACG |
TaINP3.4 | GCAGTTGATCCTCAGGCACT | AGGGTTTGTAGCCGCAGATT |
TaINP3.9 | CTCAGCACACCATCCCAACA | TCTTCCACATTCCCGACAGC |
TaINP3.14 | CAGGCTGATAATCTTCGTCTGC | GTGCAGATTGGCGAGTGGTT |
TaINP4.1 | CCAAAAGGTGGTATTGCGGA | ACTGCTGCTCTGTTAGAGGC |
TaINP4.4 | ACTCCAGAAAGCTCGACAGC | CAGAGAGAACTGAGGGCACG |
18s | CGCGCGCTACGGCTTTGACCTA | CGGCAGATTCCCACGCGTTACG |
Table 1 Fluorescence quantification primers
基因名称 Gene name | 正向引物 Forward primer (5’-3’) | 反向引物 Reverse primer (5’-3’) |
---|---|---|
TaINP2.2 | TCGTAGATGGGATAATGGGGC | CAAGCCACAGGAAGCACCTT |
TaINP2.5 | ATTGGGTTTCAGACGGAGCA | CAAGGGCTTGTCAGACCTGT |
TaINP2.8 | CCGCTGGAATCTTGTCCGTTA | TTCCTTGCAGCCTCACGATT |
TaINP3.2 | TCCATGAGTGGAAATGGGGC | ACTACGCAGCTCAGTATCGC |
TaINP3.7 | TTTTAAAGCTTGAACCCCTAACTGA | ACCCAGCCAATGTTTCTGCC |
TaINP3.12 | TTTTAAAGCTTGAACCCCTAACTGA | CCGATAGACCCAGCCAACG |
TaINP3.4 | GCAGTTGATCCTCAGGCACT | AGGGTTTGTAGCCGCAGATT |
TaINP3.9 | CTCAGCACACCATCCCAACA | TCTTCCACATTCCCGACAGC |
TaINP3.14 | CAGGCTGATAATCTTCGTCTGC | GTGCAGATTGGCGAGTGGTT |
TaINP4.1 | CCAAAAGGTGGTATTGCGGA | ACTGCTGCTCTGTTAGAGGC |
TaINP4.4 | ACTCCAGAAAGCTCGACAGC | CAGAGAGAACTGAGGGCACG |
18s | CGCGCGCTACGGCTTTGACCTA | CGGCAGATTCCCACGCGTTACG |
基因名称 Gene name | 基因号 Gene ID | 染色体Chromosome | 蛋白长度Number of amino acid/aa | 分子量Molecular weight/Da | 等电点 pI | 不稳定指数Instability index | 脂肪系数Aliphatic index | 总亲水性指数 GRAVY | 亚细胞定位Subcellular location |
---|---|---|---|---|---|---|---|---|---|
TaINP1.4 | TraesCS1B02G127400 | 1B | 333 | 36 564.21 | 6.14 | 54.41 | 83.60 | -0.416 | 细胞核Nucleus |
TaINP6.2 | TraesCS6A02G248300 | 6A | 232 | 25 301.97 | 9.61 | 67.01 | 93.15 | -0.088 | 细胞核Nucleus |
TaINP3.6 | TraesCS3B02G120900 | 3B | 260 | 27 937.63 | 5.43 | 54.74 | 86.58 | -0.181 | 细胞核Nucleus |
TaINP2.4 | TraesCS2A02G526300 | 2A | 419 | 46 270.21 | 6.24 | 59.92 | 71.89 | -0.536 | 细胞核Nucleus |
TaINP3.3 | TraesCS3A02G306200 | 3A | 296 | 31 824.06 | 5.63 | 49.12 | 88.34 | -0.210 | 细胞核Nucleus |
TaINP3.11 | TraesCS3D02G105800 | 3D | 260 | 27 976.71 | 5.46 | 55.33 | 85.85 | -0.202 | 细胞核Nucleus |
TaINP1.9 | TraesCS1D02G400300 | 1D | 226 | 2 449.19 | 5.65 | 46.52 | 98.14 | -0.078 | 线粒体Mitochondria |
TaINP1.6 | TraesCS1B02G420300 | 1B | 226 | 24 449.82 | 5.65 | 47.19 | 96.86 | -0.098 | 线粒体Mitochondria |
TaINP5.3 | TraesCS5B02G265300 | 5B | 525 | 58 620.02 | 6.58 | 70.75 | 76.63 | -0.560 | 细胞核Nucleus |
TaINP4.2 | TraesCS4A02G183400 | 4A | 539 | 58 911.63 | 6.44 | 54.62 | 69.13 | -0.568 | 细胞核Nucleus |
TaINP5.2 | TraesCS5A02G265600 | 5A | 518 | 57 856.21 | 6.51 | 68.93 | 77.30 | -0.550 | 细胞核Nucleus |
TaINP1.1 | TraesCS1A02G096300 | 1A | 335 | 36 675.16 | 5.71 | 57.88 | 82.27 | -0.438 | 细胞核Nucleus |
TaINP1.8 | TraesCS1D02G276100 | 1D | 481 | 53 546.29 | 5.95 | 62.72 | 74.39 | -0.503 | 细胞核Nucleus |
TaINP4.1 | TraesCS4A02G126300 | 4A | 335 | 37 349.28 | 7.87 | 51.81 | 84.00 | -0.491 | 细胞核Nucleus |
TaINP7.2 | TraesCS7B02G114300 | 7B | 448 | 48 464.72 | 7.36 | 56.89 | 82.01 | -0.285 | 细胞核Nucleus |
TaINP1.5 | TraesCS1B02G285800 | 1B | 526 | 58 065.31 | 5.79 | 61.88 | 73.23 | -0.471 | 细胞核Nucleus |
TaINP6.4 | TraesCS6B02G276400 | 6B | 232 | 25 314.02 | 9.46 | 68.12 | 92.72 | -0.100 | 叶绿体Chloroplast |
TaINP4.5 | TraesCS4D02G129900 | 4D | 537 | 58 671.34 | 6.41 | 54.16 | 68.47 | -0.567 | 细胞核Nucleus |
TaINP3.13 | TraesCS3D02G295800 | 3D | 292 | 31 490.63 | 5.37 | 49.44 | 89.55 | -0.191 | 叶绿体Chloroplast |
TaINP3.9 | TraesCS3B02G365100 | 3B | 477 | 51 918.14 | 6.78 | 50.58 | 75.68 | -0.494 | 细胞核Nucleus |
TaINP4.3 | TraesCS4B02G135000 | 4B | 566 | 6 217.82 | 6.40 | 56.40 | 66.70 | -0.614 | 细胞核Nucleus |
TaINP2.9 | TraesCS2D02G529000 | 2D | 425 | 46 843.83 | 5.86 | 57.18 | 73.39 | -0.507 | 细胞核Nucleus |
TaINP5.1 | TraesCS5A02G174200 | 5A | 467 | 51 251.99 | 7.02 | 53.54 | 77.41 | -0.473 | 细胞核Nucleus |
TaINP2.6 | TraesCS2B02G512700 | 2B | 240 | 26 178.71 | 9.20 | 44.06 | 86.33 | -0.215 | 细胞质Cytoplasm |
Table 2 Basic physical and chemical properties of TaINP1 gene family in wheat
基因名称 Gene name | 基因号 Gene ID | 染色体Chromosome | 蛋白长度Number of amino acid/aa | 分子量Molecular weight/Da | 等电点 pI | 不稳定指数Instability index | 脂肪系数Aliphatic index | 总亲水性指数 GRAVY | 亚细胞定位Subcellular location |
---|---|---|---|---|---|---|---|---|---|
TaINP1.4 | TraesCS1B02G127400 | 1B | 333 | 36 564.21 | 6.14 | 54.41 | 83.60 | -0.416 | 细胞核Nucleus |
TaINP6.2 | TraesCS6A02G248300 | 6A | 232 | 25 301.97 | 9.61 | 67.01 | 93.15 | -0.088 | 细胞核Nucleus |
TaINP3.6 | TraesCS3B02G120900 | 3B | 260 | 27 937.63 | 5.43 | 54.74 | 86.58 | -0.181 | 细胞核Nucleus |
TaINP2.4 | TraesCS2A02G526300 | 2A | 419 | 46 270.21 | 6.24 | 59.92 | 71.89 | -0.536 | 细胞核Nucleus |
TaINP3.3 | TraesCS3A02G306200 | 3A | 296 | 31 824.06 | 5.63 | 49.12 | 88.34 | -0.210 | 细胞核Nucleus |
TaINP3.11 | TraesCS3D02G105800 | 3D | 260 | 27 976.71 | 5.46 | 55.33 | 85.85 | -0.202 | 细胞核Nucleus |
TaINP1.9 | TraesCS1D02G400300 | 1D | 226 | 2 449.19 | 5.65 | 46.52 | 98.14 | -0.078 | 线粒体Mitochondria |
TaINP1.6 | TraesCS1B02G420300 | 1B | 226 | 24 449.82 | 5.65 | 47.19 | 96.86 | -0.098 | 线粒体Mitochondria |
TaINP5.3 | TraesCS5B02G265300 | 5B | 525 | 58 620.02 | 6.58 | 70.75 | 76.63 | -0.560 | 细胞核Nucleus |
TaINP4.2 | TraesCS4A02G183400 | 4A | 539 | 58 911.63 | 6.44 | 54.62 | 69.13 | -0.568 | 细胞核Nucleus |
TaINP5.2 | TraesCS5A02G265600 | 5A | 518 | 57 856.21 | 6.51 | 68.93 | 77.30 | -0.550 | 细胞核Nucleus |
TaINP1.1 | TraesCS1A02G096300 | 1A | 335 | 36 675.16 | 5.71 | 57.88 | 82.27 | -0.438 | 细胞核Nucleus |
TaINP1.8 | TraesCS1D02G276100 | 1D | 481 | 53 546.29 | 5.95 | 62.72 | 74.39 | -0.503 | 细胞核Nucleus |
TaINP4.1 | TraesCS4A02G126300 | 4A | 335 | 37 349.28 | 7.87 | 51.81 | 84.00 | -0.491 | 细胞核Nucleus |
TaINP7.2 | TraesCS7B02G114300 | 7B | 448 | 48 464.72 | 7.36 | 56.89 | 82.01 | -0.285 | 细胞核Nucleus |
TaINP1.5 | TraesCS1B02G285800 | 1B | 526 | 58 065.31 | 5.79 | 61.88 | 73.23 | -0.471 | 细胞核Nucleus |
TaINP6.4 | TraesCS6B02G276400 | 6B | 232 | 25 314.02 | 9.46 | 68.12 | 92.72 | -0.100 | 叶绿体Chloroplast |
TaINP4.5 | TraesCS4D02G129900 | 4D | 537 | 58 671.34 | 6.41 | 54.16 | 68.47 | -0.567 | 细胞核Nucleus |
TaINP3.13 | TraesCS3D02G295800 | 3D | 292 | 31 490.63 | 5.37 | 49.44 | 89.55 | -0.191 | 叶绿体Chloroplast |
TaINP3.9 | TraesCS3B02G365100 | 3B | 477 | 51 918.14 | 6.78 | 50.58 | 75.68 | -0.494 | 细胞核Nucleus |
TaINP4.3 | TraesCS4B02G135000 | 4B | 566 | 6 217.82 | 6.40 | 56.40 | 66.70 | -0.614 | 细胞核Nucleus |
TaINP2.9 | TraesCS2D02G529000 | 2D | 425 | 46 843.83 | 5.86 | 57.18 | 73.39 | -0.507 | 细胞核Nucleus |
TaINP5.1 | TraesCS5A02G174200 | 5A | 467 | 51 251.99 | 7.02 | 53.54 | 77.41 | -0.473 | 细胞核Nucleus |
TaINP2.6 | TraesCS2B02G512700 | 2B | 240 | 26 178.71 | 9.20 | 44.06 | 86.33 | -0.215 | 细胞质Cytoplasm |
基因名称 Gene name | 基因号 Gene ID | 染色体Chromosome | 蛋白长度Number of amino acid/aa | 分子量Molecular weight/Da | 等电点 pI | 不稳定指数Instability index | 脂肪系数Aliphatic index | 总亲水性指数 GRAVY | 亚细胞定位Subcellular location |
---|---|---|---|---|---|---|---|---|---|
TaINP3.4 | TraesCS3A02G334100 | 3A | 475 | 51 766.93 | 6.53 | 52.32 | 74.36 | -0.514 | 细胞核Nucleus |
TaINP4.4 | TraesCS4B02G178600 | 4B | 334 | 37 268.18 | 7.87 | 50.04 | 82.22 | -0.513 | 细胞核Nucleus |
TaINP4.5 | TraesCS3B02G220400 | 3B | 327 | 36 381.83 | 7.79 | 59.51 | 76.51 | -0.622 | 细胞核Nucleus |
TaINP3.5 | TraesCS3A02G372400 | 3A | 557 | 60 348.69 | 6.31 | 59.06 | 70.09 | -0.472 | 细胞核Nucleus |
TaINP6.6 | TraesCS6D02G230400 | 6D | 232 | 25 274.05 | 9.97 | 65.71 | 96.08 | -0.029 | 叶绿体Chloroplast |
TaINP1.3 | TraesCS1A02G392200 | 1A | 226 | 24 449.82 | 5.47 | 43.61 | 98.14 | -0.073 | 线粒体Mitochondria |
TaINP6.3 | TraesCS6B02G193200 | 6B | 458 | 50 063.37 | 7.30 | 52.50 | 76.05 | -0.464 | 细胞核Nucleus |
TaINP3.14 | TraesCS3D02G327600 | 3D | 477 | 51 979.22 | 6.53 | 53.94 | 75.47 | -0.495 | 细胞核Nucleus |
TaINP1.2 | TraesCS1A02G276600 | 1A | 481 | 53 549.34 | 6.29 | 63.78 | 73.97 | -0.512 | 细胞核Nucleus |
TaINP1.7 | TraesCS1D02G105300 | 1D | 338 | 37 042.89 | 6.56 | 58.57 | 84.97 | -0.371 | 细胞核Nucleus |
TaINP3.12 | TraesCS3D02G194800 | 3D | 327 | 36 386.85 | 8.49 | 59.18 | 76.51 | -0.626 | 细胞核Nucleus |
TaINP2.1 | TraesCS2A02G010800 | 2A | 198 | 21 663.49 | 9.56 | 54.16 | 83.54 | -0.271 | 细胞核Nucleus |
TaINP3.1 | TraesCS3A02G103500 | 3A | 260 | 27 872.59 | 5.60 | 50.35 | 85.85 | -0.191 | 叶绿体Chloroplast |
TaINP4.6 | TraesCS4D02G180200 | 4D | 329 | 36 682.46 | 7.87 | 52.80 | 81.40 | -0.527 | 胞核Nucleus |
TaINP5.5 | TraesCS5D02G273500 | 5D | 517 | 57 757.09 | 6.55 | 68.94 | 77.43 | -0.544 | 细胞核Nucleus |
TaINP2.8 | TraesCS2D02G096800 | 2D | 294 | 32 644.01 | 6.01 | 60.35 | 78.10 | -0.431 | 细胞核Nucleus |
TaINP3.2 | TraesCS3A02G190700 | 3A | 350 | 38 979.69 | 6.36 | 59.18 | 75.11 | -0.647 | 细胞核Nucleus |
Table 2 Basic physical and chemical properties of TaINP1 gene family in wheat
基因名称 Gene name | 基因号 Gene ID | 染色体Chromosome | 蛋白长度Number of amino acid/aa | 分子量Molecular weight/Da | 等电点 pI | 不稳定指数Instability index | 脂肪系数Aliphatic index | 总亲水性指数 GRAVY | 亚细胞定位Subcellular location |
---|---|---|---|---|---|---|---|---|---|
TaINP3.4 | TraesCS3A02G334100 | 3A | 475 | 51 766.93 | 6.53 | 52.32 | 74.36 | -0.514 | 细胞核Nucleus |
TaINP4.4 | TraesCS4B02G178600 | 4B | 334 | 37 268.18 | 7.87 | 50.04 | 82.22 | -0.513 | 细胞核Nucleus |
TaINP4.5 | TraesCS3B02G220400 | 3B | 327 | 36 381.83 | 7.79 | 59.51 | 76.51 | -0.622 | 细胞核Nucleus |
TaINP3.5 | TraesCS3A02G372400 | 3A | 557 | 60 348.69 | 6.31 | 59.06 | 70.09 | -0.472 | 细胞核Nucleus |
TaINP6.6 | TraesCS6D02G230400 | 6D | 232 | 25 274.05 | 9.97 | 65.71 | 96.08 | -0.029 | 叶绿体Chloroplast |
TaINP1.3 | TraesCS1A02G392200 | 1A | 226 | 24 449.82 | 5.47 | 43.61 | 98.14 | -0.073 | 线粒体Mitochondria |
TaINP6.3 | TraesCS6B02G193200 | 6B | 458 | 50 063.37 | 7.30 | 52.50 | 76.05 | -0.464 | 细胞核Nucleus |
TaINP3.14 | TraesCS3D02G327600 | 3D | 477 | 51 979.22 | 6.53 | 53.94 | 75.47 | -0.495 | 细胞核Nucleus |
TaINP1.2 | TraesCS1A02G276600 | 1A | 481 | 53 549.34 | 6.29 | 63.78 | 73.97 | -0.512 | 细胞核Nucleus |
TaINP1.7 | TraesCS1D02G105300 | 1D | 338 | 37 042.89 | 6.56 | 58.57 | 84.97 | -0.371 | 细胞核Nucleus |
TaINP3.12 | TraesCS3D02G194800 | 3D | 327 | 36 386.85 | 8.49 | 59.18 | 76.51 | -0.626 | 细胞核Nucleus |
TaINP2.1 | TraesCS2A02G010800 | 2A | 198 | 21 663.49 | 9.56 | 54.16 | 83.54 | -0.271 | 细胞核Nucleus |
TaINP3.1 | TraesCS3A02G103500 | 3A | 260 | 27 872.59 | 5.60 | 50.35 | 85.85 | -0.191 | 叶绿体Chloroplast |
TaINP4.6 | TraesCS4D02G180200 | 4D | 329 | 36 682.46 | 7.87 | 52.80 | 81.40 | -0.527 | 胞核Nucleus |
TaINP5.5 | TraesCS5D02G273500 | 5D | 517 | 57 757.09 | 6.55 | 68.94 | 77.43 | -0.544 | 细胞核Nucleus |
TaINP2.8 | TraesCS2D02G096800 | 2D | 294 | 32 644.01 | 6.01 | 60.35 | 78.10 | -0.431 | 细胞核Nucleus |
TaINP3.2 | TraesCS3A02G190700 | 3A | 350 | 38 979.69 | 6.36 | 59.18 | 75.11 | -0.647 | 细胞核Nucleus |
Fig. 1 Phylogenetic tree of INP1 genes among different speciesNote:Ta—Triticum aestivum L.; Os—Oryza sativa L.; Zm—Zea mays L.; At—Arabidopsis thaliana; Hv—Hordeum vulgare L.; Pp—Physcomitrium patens L..
Fig. 3 Collinear analysis of INP1 genesA: Collinear analysis of TaINP1 genes in wheat among A, B, D chromosomes; B: Collinear analysis between TaINP1 genes in wheat and rice, Arabidopsis and maize; Ta—Triticum aestivum L.; Zm—Zea mays L.; Os—Oryza sativa L.; At—Arabidopsis thaliana
Fig. 4 Expression heat map of TaINP1 genes in wheatA:Expression of different tissues based on Wheatomics database; B: Expression of early panicle with different stages based on Wheat Expression Browser; C:Expression of young spikes in different stages D: Expression of different temperature treatments. R1—Roots of Azhurnaya in vegetative growth period; R2—Roots of Azhurnaya in reproductive growth period; R3—Roots of Chinese spring in vegetative growth period; R4—Roots of Chinese spring in reproductive growth period; L1—Leaves of Azhurnaya in vegetative growth period; L2—Leaves of Azhurnaya in reproductive growth period; L3—Leaves of Chinese spring in vegetative growth period; L4—Leaves of Chinese spring in reproductive growth period; L5—Leaves of other germplasms; S1—Spike of Azhurnaya;S2—Spike of Chinese spring; G1—Grains of Azhurnaya;G2—Grains of Chinese spring; S3—Spike of other germplasms; G3—Grains of other germplasms
Fig. 5 Expression analysis of TaINP1 genes in different tissues of wheatNote:Different lowercase letters indicate significant differences between different tissues at P<0.05 level.
Fig. 6 Expression of TaINP1 genes in pollen under low temperature treatmentNote:Different lowercase letters indicate significant differences between different temperatures at P<0.05 level.
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